Package: crew.cluster 0.3.2.9004

crew.cluster: Crew Launcher Plugins for Traditional High-Performance Computing Clusters

In computationally demanding analysis projects, statisticians and data scientists asynchronously deploy long-running tasks to distributed systems, ranging from traditional clusters to cloud services. The 'crew.cluster' package extends the 'mirai'-powered 'crew' package with worker launcher plugins for traditional high-performance computing systems. Inspiration also comes from packages 'mirai' by Gao (2023) <https://github.com/shikokuchuo/mirai>, 'future' by Bengtsson (2021) <doi:10.32614/RJ-2021-048>, 'rrq' by FitzJohn and Ashton (2023) <https://github.com/mrc-ide/rrq>, 'clustermq' by Schubert (2019) <doi:10.1093/bioinformatics/btz284>), and 'batchtools' by Lang, Bischl, and Surmann (2017). <doi:10.21105/joss.00135>.

Authors:William Michael Landau [aut, cre], Michael Gilbert Levin [aut], Brendan Furneaux [aut], Eli Lilly and Company [cph]

crew.cluster_0.3.2.9004.tar.gz
crew.cluster_0.3.2.9004.zip(r-4.5)crew.cluster_0.3.2.9004.zip(r-4.4)crew.cluster_0.3.2.9004.zip(r-4.3)
crew.cluster_0.3.2.9004.tgz(r-4.4-any)crew.cluster_0.3.2.9004.tgz(r-4.3-any)
crew.cluster_0.3.2.9004.tar.gz(r-4.5-noble)crew.cluster_0.3.2.9004.tar.gz(r-4.4-noble)
crew.cluster_0.3.2.9004.tgz(r-4.4-emscripten)crew.cluster_0.3.2.9004.tgz(r-4.3-emscripten)
crew.cluster.pdf |crew.cluster.html
crew.cluster/json (API)
NEWS

# Install 'crew.cluster' in R:
install.packages('crew.cluster', repos = c('https://wlandau.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/wlandau/crew.cluster/issues

On CRAN:

crewhigh-performance-computing

20 exports 24 stars 3.03 score 27 dependencies 39 scripts 1.2k downloads

Last updated 9 days agofrom:f916bfb3b6. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 09 2024
R-4.5-winOKSep 09 2024
R-4.5-linuxOKSep 09 2024
R-4.4-winOKSep 09 2024
R-4.4-macOKSep 09 2024
R-4.3-winOKSep 09 2024
R-4.3-macOKSep 09 2024

Exports:crew_class_launcher_clustercrew_class_launcher_lsfcrew_class_launcher_pbscrew_class_launcher_sgecrew_class_launcher_slurmcrew_class_monitor_clustercrew_class_monitor_sgecrew_class_monitor_slurmcrew_controller_lsfcrew_controller_pbscrew_controller_sgecrew_controller_slurmcrew_launcher_clustercrew_launcher_lsfcrew_launcher_pbscrew_launcher_sgecrew_launcher_slurmcrew_monitor_clustercrew_monitor_sgecrew_monitor_slurm

Dependencies:clicrewdata.tablefansifastmapgetipgluelaterlifecyclemagrittrmirainanonextpillarpkgconfigprocessxpromisespsR6Rcpprlangtibbletidyselectutf8vctrswithrxml2yaml